PCR Detection and Sequence Analysis of Duck Circovirus in Sick Muscovy Ducks

作     者：Shi-jin JIANG Xing-xiao ZHANG Shao-ning LIU Yu WANG Yi-bo KONG Xiu-li WEI Ya-ni SUN Qin ZHAO 

作者机构：College of Animal Science and Veterinary Medicine Shandong Agricultural University Tai＇an 271018 China Department of Basic Medical Sciences Taishan Medical College Tai＇an 271000 China 

基　　金：Shandong Provincial Excellent YoungScientist Fund (2004BS06002) Innovation Fund ofShandong Agricultural University 

出 版 物：《Virologica Sinica》 (中国病毒学（英文版）)

年 卷 期：2008年第23卷第4期

页      码：265-271页

摘      要：The duck circovirus （DuCV） infection in sick ducks from Fujian Province was investigated. The liver samples of 43 sick Muscovy ducks with infectious serositis were collected from 12 duck farms in Fujian Province Based on the published sequences of DuCV, two primers were designed for the detection of DuCV and four pairs of primers were designed to amplify four overlapping fragments that cover the complete genome of DuCV. The specific PCR products were amplified from positive samples. The fragments were then cloned into pMD18-T vector and sequenced, and the full length genomic sequence of the FJ0601 isolate of DuCV was obtained. PCR analysis showed that the proportion of ducks which were positive for circovirus was 79% and 10 out of the 12 farms were positive. Sequence analysis showed that the complete genome of DuCV-FJ0601 was 1988 bp and possessed features common to the family Circoviridae which included a stem-loop structure and the Rep protein motifs. Homology analysis showed that FJ0601 isolate of DuCV had 97.3%-97.5% nucleotide sequence identity to all the four Taiwan isolates （TC1/2002, TC2/2002, TC3/2002, TC4/2002）, 82.9% identity to the America （33753-52） isolate and 82.3% identity to the Germany isolate. Phylogenetic analysis with Clustal W, however, showed that FJ0601 isolate of DuCV was on a common branch with Taiwan isolates, and Germany and America isolates belonged to the other branch.

主 题 词：Duck Circovirus (DuCV) PCR Full length genome Sequence analysis 

学科分类：090601[090601] 09[农学] 0906[农学-水产类] 

核心收录：

D　O　I：10.1007/s12250-008-2934-y

馆 藏 号：203105565...